That sounds right. I don't think the manifold on the 2003 has holes corresponding to the slots in the exhaust elbow; I'm not absolutely certain, but I don't recall seeing them when I had my exhaust elbow off.I seem to recall that the same elbow was used for the turbo and non turbo version of the 2003. 28hp and 43hp.
The turbo version had some form of riser between the elbow and block which was why the additional holes are there.